(2S,7R,11S,16R)-1,8,10,17-Tetraazapentacyclo[8.8.1.18,17.0 2,7.011,16]icosane and its enantiomer. Synthesis, NMR analysis and X-ray crystal structure

Julie F. Glister, Keith Vaughan, Kumar Biradha, Michael J. Zaworotko

Research output: Contribution to journalArticlepeer-review

Abstract

(2S,7R,11S,16R)-1,8,10,17-tetraazapentacyclo[8.8.1.18,17.0 2,7.011,16]icosane (7) has been synthesized by reaction of commercial 1,2-cyclohexanediamine with formaldehyde in dimethylformamide solution. The crystal structure of 7 has been determined by single crystal X-ray diffraction analysis. The crystal structure of 7 shows that the geometry of the N-atoms is the less likely cis-configuration, the precise configuration that was claimed by previous investigators to be unlikely to exist! The C-C-C bond angles within the cyclohexane rings of 7 are in the range 113.9(7)-124.6(8) °, indicating that the cyclohexane rings are more planar than chair-like. The N-C-N bond angles around the bridging methylene groups are similarly distorted from tetrahedral geometry. The crystal structure of 7 is compared with the previously reported structures of 1,3,6,8-tetraazatricyclo[4.4.1.1 3,8]dodecane(1) and 1,4-dimethano-dibenzo[d,i]-1,3,6,8-tetrazecine(2) . The title compound (7) {C16H28N4}, crystallizes in the orthorhombic, space group Fdd2, with lattice constants: a=11.9733(17) Å, b=12.8485(18) Å, c=19.095(3) Å, α=90°, β=90°, γ=90°, V=2937.5(7) Å3, Z=8, Dc=1.250 mg m-3, F(000)=1216, R1=0.0834, wR2=0.2255.

Original languageEnglish
Pages (from-to)78-83
Number of pages6
JournalJournal of Molecular Structure
Volume749
Issue number1-3
DOIs
Publication statusPublished - 15 Jul 2005
Externally publishedYes

Keywords

  • cis-Geometry
  • Crystal structure
  • Cyclohexanediamine
  • Formaldehyde
  • Nuclear magnetic resonance spectroscopy [NMR]
  • Tetraazapentacyclo[8.8.1.1.0.0 ]icosane
  • Tetraazatricyclododecane
  • X-ray

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