Clinical significance of DNA methylation in chronic lymphocytic leukemia patients: Results from 3 UK clinical trials

  • Tomasz K. Wojdacz
  • , Harindra E. Amarasinghe
  • , Latha Kadalayil
  • , Alice Beattie
  • , Jade Forster
  • , Stuart J. Blakemore
  • , Helen Parker
  • , Dean Bryant
  • , Marta Larrayoz
  • , Ruth Clifford
  • , Pauline Robbe
  • , Zadie A. Davis
  • , Monica Else
  • , Dena R. Howard
  • , Basile Stamatopoulos
  • , Andrew J. Steele
  • , Richard Rosenquist
  • , Andrew Collins
  • , Andrew R. Pettitt
  • , Peter Hillmen
  • Christoph Plass, Anna Schuh, Daniel Catovsky, David G. Oscier, Matthew J.J. Rose-Zerilli, Christopher C. Oakes, Jonathan C. Strefford

Research output: Contribution to journalArticlepeer-review

Abstract

Chronic lymphocytic leukemia patients with mutated immunoglobulin heavy-chain genes (IGHV-M), particularly those lacking poor-risk genomic lesions, often respond well to chemoimmunotherapy (CIT). DNA methylation profiling can subdivide early-stage patients into naive B-cell–like CLL (n-CLL), memory B-cell–like CLL (m-CLL), and intermediate CLL (i-CLL), with differing times to first treatment and overall survival. However, whether DNA methylation can identify patients destined to respond favorably to CIT has not been ascertained. We classified treatment-naive patients (n 5 605) from 3 UK chemo and CIT clinical trials into the 3 epigenetic subgroups, using pyrosequencing and microarray analysis, and performed expansive survival analysis. The n-CLL, i-CLL, and m-CLL signatures were found in 80% (n 5 245/305), 17% (53/305), and 2% (7/305) of IGHV-unmutated (IGHV-U) cases, respectively, and in 9%, (19/216), 50% (108/216), and 41% (89/216) of IGHV-M cases, respectively. Multivariate Cox proportional analysis identified m-CLL as an independent prognostic factor for overall survival (hazard ratio [HR], 0.46; 95% confidence interval [CI], 0.24-0.87; P 5 .018) in CLL4, and for progression-free survival (HR, 0.25; 95% CI, 0.10-0.57; P 5 .002) in ARCTIC and ADMIRE patients. The analysis of epigenetic subgroups in patients entered into 3 first-line UK CLL trials identifies m-CLL as an independent marker of prolonged survival and may aid in the identification of patients destined to demonstrate prolonged survival after CIT.

Original languageEnglish
Pages (from-to)2474-2481
Number of pages8
JournalBlood Advances
Volume3
Issue number16
DOIs
Publication statusPublished - 27 Aug 2019
Externally publishedYes

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