Community-wide hackathons to identify central themes in single-cell multi-omics

Kim Anh Lê Cao; Al J. Abadi; Emily F. Davis-Marcisak; Lauren Hsu; Arshi Arora; Alexis Coullomb; Atul Deshpande; Yuzhou Feng; Pratheepa Jeganathan; Melanie Loth; Chen Meng; Wancen Mu; Vera Pancaldi; Kris Sankaran; Amrit Singh; Joshua S. Sodicoff; Genevieve L. Stein-O’Brien; Ayshwarya Subramanian; Joshua D. Welch; Yue You; Ricard Argelaguet; Vincent J. Carey; Ruben Dries; Casey S. Greene; Susan Holmes; Michael I. Love; Matthew E. Ritchie; Guo Cheng Yuan; Aedin C. Culhane; Elana Fertig

doi:10.1186/s13059-021-02433-9

Community-wide hackathons to identify central themes in single-cell multi-omics

Kim Anh Lê Cao
, Al J. Abadi
, Emily F. Davis-Marcisak
, Lauren Hsu
, Arshi Arora
, Alexis Coullomb
, Atul Deshpande
, Yuzhou Feng
, Pratheepa Jeganathan
, Melanie Loth
, Chen Meng
, Wancen Mu
, Vera Pancaldi
, Kris Sankaran
, Amrit Singh
, Joshua S. Sodicoff
, Genevieve L. Stein-O’Brien
, Ayshwarya Subramanian
, Joshua D. Welch
, Yue You

Ricard Argelaguet, Vincent J. Carey, Ruben Dries, Casey S. Greene, Susan Holmes, Michael I. Love, Matthew E. Ritchie, Guo Cheng Yuan, Aedin C. Culhane, Elana Fertig

University of Melbourne
Johns Hopkins University
Dana-Farber Cancer Institute
Harvard University
Memorial Sloan-Kettering Cancer Center
Centre de Recherches en Cancérologie de Toulouse
McMaster University
Technical University of Munich
University of North Carolina at Chapel Hill
Barcelona Supercomputing Center
University of Wisconsin
University of British Columbia
PROOF Centre of Excellence
University of Michigan, Ann Arbor
Department of Molecular Biology
Babraham Institute
Boston University
University of Colorado Anschutz Medical Campus
Stanford University
Icahn School of Medicine at Mount Sinai

Research output: Contribution to journal › Article › peer-review

Original language	English
Article number	220
Journal	Genome Biology
Volume	22
Issue number	1
DOIs	https://doi.org/10.1186/s13059-021-02433-9
Publication status	Published - Dec 2021
Externally published	Yes

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Lê Cao, K. A., Abadi, A. J., Davis-Marcisak, E. F., Hsu, L., Arora, A., Coullomb, A., Deshpande, A., Feng, Y., Jeganathan, P., Loth, M., Meng, C., Mu, W., Pancaldi, V., Sankaran, K., Singh, A., Sodicoff, J. S., Stein-O’Brien, G. L., Subramanian, A., Welch, J. D., ... Fertig, E. (2021). Community-wide hackathons to identify central themes in single-cell multi-omics. Genome Biology, 22(1), Article 220. https://doi.org/10.1186/s13059-021-02433-9

@article{e7bfc956526046048c44039ddaac4a5c,

title = "Community-wide hackathons to identify central themes in single-cell multi-omics",

author = "\{L{\^e} Cao\}, \{Kim Anh\} and Abadi, \{Al J.\} and Davis-Marcisak, \{Emily F.\} and Lauren Hsu and Arshi Arora and Alexis Coullomb and Atul Deshpande and Yuzhou Feng and Pratheepa Jeganathan and Melanie Loth and Chen Meng and Wancen Mu and Vera Pancaldi and Kris Sankaran and Amrit Singh and Sodicoff, \{Joshua S.\} and Stein-O{\textquoteright}Brien, \{Genevieve L.\} and Ayshwarya Subramanian and Welch, \{Joshua D.\} and Yue You and Ricard Argelaguet and Carey, \{Vincent J.\} and Ruben Dries and Greene, \{Casey S.\} and Susan Holmes and Love, \{Michael I.\} and Ritchie, \{Matthew E.\} and Yuan, \{Guo Cheng\} and Culhane, \{Aedin C.\} and Elana Fertig",

year = "2021",

month = dec,

doi = "10.1186/s13059-021-02433-9",

language = "English",

volume = "22",

journal = "Genome Biology",

issn = "1474-7596",

number = "1",

}

Lê Cao, KA, Abadi, AJ, Davis-Marcisak, EF, Hsu, L, Arora, A, Coullomb, A, Deshpande, A, Feng, Y, Jeganathan, P, Loth, M, Meng, C, Mu, W, Pancaldi, V, Sankaran, K, Singh, A, Sodicoff, JS, Stein-O’Brien, GL, Subramanian, A, Welch, JD, You, Y, Argelaguet, R, Carey, VJ, Dries, R, Greene, CS, Holmes, S, Love, MI, Ritchie, ME, Yuan, GC, Culhane, AC & Fertig, E 2021, 'Community-wide hackathons to identify central themes in single-cell multi-omics', Genome Biology, vol. 22, no. 1, 220. https://doi.org/10.1186/s13059-021-02433-9

TY - JOUR

T1 - Community-wide hackathons to identify central themes in single-cell multi-omics

AU - Lê Cao, Kim Anh

AU - Abadi, Al J.

AU - Davis-Marcisak, Emily F.

AU - Hsu, Lauren

AU - Arora, Arshi

AU - Coullomb, Alexis

AU - Deshpande, Atul

AU - Feng, Yuzhou

AU - Jeganathan, Pratheepa

AU - Loth, Melanie

AU - Meng, Chen

AU - Mu, Wancen

AU - Pancaldi, Vera

AU - Sankaran, Kris

AU - Singh, Amrit

AU - Sodicoff, Joshua S.

AU - Stein-O’Brien, Genevieve L.

AU - Subramanian, Ayshwarya

AU - Welch, Joshua D.

AU - You, Yue

AU - Argelaguet, Ricard

AU - Carey, Vincent J.

AU - Dries, Ruben

AU - Greene, Casey S.

AU - Holmes, Susan

AU - Love, Michael I.

AU - Ritchie, Matthew E.

AU - Yuan, Guo Cheng

AU - Culhane, Aedin C.

AU - Fertig, Elana

PY - 2021/12

Y1 - 2021/12

UR - https://www.scopus.com/pages/publications/85112128617

U2 - 10.1186/s13059-021-02433-9

DO - 10.1186/s13059-021-02433-9

M3 - Article

C2 - 34353350

AN - SCOPUS:85112128617

SN - 1474-7596

VL - 22

JO - Genome Biology

JF - Genome Biology

IS - 1

M1 - 220

ER -

Community-wide hackathons to identify central themes in single-cell multi-omics

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