Domain-specific Design of Patient Classification in Cancer-Related Cachexia Research

Alexander Wickert; Anna Lena Lamprecht; Tiziana Margaria

doi:10.1145/3193992.3194002

Domain-specific Design of Patient Classification in Cancer-Related Cachexia Research

Alexander Wickert
, Anna Lena Lamprecht
, Tiziana Margaria

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

Abstract

We apply an IDE for user-level process design and composition to a real-life case study: A complex workflow from an ongoing global cancer-related cachexia research project. Originally buried in a manually operated spreadsheet, the process is now fully automated and integrated into the project database, ensuring the immediate availability, consistency and reproducibility of the outcomes. Our integrated solution enables the scientists to immediately execute the processes and easily customize both processes and data model to continuously changing experimental setups. The data modeling is provided by the Dynamic Web Application framework and the process modeling functionalities by the Java Application Building Center, both following the paradigm of eXtreme Model-Driven Design for model-driven software development.

Original language	English
Title of host publication	Proceedings - 2018 ACM/IEEE Conference on Formal Methods in Software Engineering, FormaliSE 2018
Publisher	Institute of Electrical and Electronics Engineers Inc.
Pages	60-63
Number of pages	4
ISBN (Electronic)	9781450357180
DOIs	https://doi.org/10.1145/3193992.3194002
Publication status	Published - 14 Nov 2018
Event	2018 ACM/IEEE Conference on Formal Methods in Software Engineering, FormaliSE 2018 - Gothenburg, Sweden Duration: 2 Jun 2018 → …

Publication series

Name	Proceedings - 2018 ACM/IEEE Conference on Formal Methods in Software Engineering, FormaliSE 2018

Conference

Conference	2018 ACM/IEEE Conference on Formal Methods in Software Engineering, FormaliSE 2018
Country/Territory	Sweden
City	Gothenburg
Period	2/06/18 → …

UN SDGs

This output contributes to the following UN Sustainable Development Goals (SDGs)

SDG 3 Good Health and Well-being

Keywords

Domainspecific modeling
Model-driven software development
Process modeling
Scientific workflows
Workflow design

Access to Document

10.1145/3193992.3194002

Cite this

Wickert, A., Lamprecht, A. L., & Margaria, T. (2018). Domain-specific Design of Patient Classification in Cancer-Related Cachexia Research. In Proceedings - 2018 ACM/IEEE Conference on Formal Methods in Software Engineering, FormaliSE 2018 (pp. 60-63). (Proceedings - 2018 ACM/IEEE Conference on Formal Methods in Software Engineering, FormaliSE 2018). Institute of Electrical and Electronics Engineers Inc.. https://doi.org/10.1145/3193992.3194002

Wickert, Alexander ; Lamprecht, Anna Lena ; Margaria, Tiziana. / Domain-specific Design of Patient Classification in Cancer-Related Cachexia Research. Proceedings - 2018 ACM/IEEE Conference on Formal Methods in Software Engineering, FormaliSE 2018. Institute of Electrical and Electronics Engineers Inc., 2018. pp. 60-63 (Proceedings - 2018 ACM/IEEE Conference on Formal Methods in Software Engineering, FormaliSE 2018).

@inproceedings{eece2119216f4ea1948f52c35d89bc22,

title = "Domain-specific Design of Patient Classification in Cancer-Related Cachexia Research",

abstract = "We apply an IDE for user-level process design and composition to a real-life case study: A complex workflow from an ongoing global cancer-related cachexia research project. Originally buried in a manually operated spreadsheet, the process is now fully automated and integrated into the project database, ensuring the immediate availability, consistency and reproducibility of the outcomes. Our integrated solution enables the scientists to immediately execute the processes and easily customize both processes and data model to continuously changing experimental setups. The data modeling is provided by the Dynamic Web Application framework and the process modeling functionalities by the Java Application Building Center, both following the paradigm of eXtreme Model-Driven Design for model-driven software development.",

keywords = "Domainspecific modeling, Model-driven software development, Process modeling, Scientific workflows, Workflow design",

author = "Alexander Wickert and Lamprecht, \{Anna Lena\} and Tiziana Margaria",

note = "Publisher Copyright: {\textcopyright} 2018 ACM-CONFERENCE. All rights reserved.; 2018 ACM/IEEE Conference on Formal Methods in Software Engineering, FormaliSE 2018 ; Conference date: 02-06-2018",

year = "2018",

month = nov,

day = "14",

doi = "10.1145/3193992.3194002",

language = "English",

series = "Proceedings - 2018 ACM/IEEE Conference on Formal Methods in Software Engineering, FormaliSE 2018",

publisher = "Institute of Electrical and Electronics Engineers Inc.",

pages = "60--63",

booktitle = "Proceedings - 2018 ACM/IEEE Conference on Formal Methods in Software Engineering, FormaliSE 2018",

}

Wickert, A, Lamprecht, AL & Margaria, T 2018, Domain-specific Design of Patient Classification in Cancer-Related Cachexia Research. in Proceedings - 2018 ACM/IEEE Conference on Formal Methods in Software Engineering, FormaliSE 2018. Proceedings - 2018 ACM/IEEE Conference on Formal Methods in Software Engineering, FormaliSE 2018, Institute of Electrical and Electronics Engineers Inc., pp. 60-63, 2018 ACM/IEEE Conference on Formal Methods in Software Engineering, FormaliSE 2018, Gothenburg, Sweden, 2/06/18. https://doi.org/10.1145/3193992.3194002

Domain-specific Design of Patient Classification in Cancer-Related Cachexia Research. / Wickert, Alexander; Lamprecht, Anna Lena; Margaria, Tiziana.
Proceedings - 2018 ACM/IEEE Conference on Formal Methods in Software Engineering, FormaliSE 2018. Institute of Electrical and Electronics Engineers Inc., 2018. p. 60-63 (Proceedings - 2018 ACM/IEEE Conference on Formal Methods in Software Engineering, FormaliSE 2018).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

TY - GEN

T1 - Domain-specific Design of Patient Classification in Cancer-Related Cachexia Research

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AU - Lamprecht, Anna Lena

AU - Margaria, Tiziana

PY - 2018/11/14

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N2 - We apply an IDE for user-level process design and composition to a real-life case study: A complex workflow from an ongoing global cancer-related cachexia research project. Originally buried in a manually operated spreadsheet, the process is now fully automated and integrated into the project database, ensuring the immediate availability, consistency and reproducibility of the outcomes. Our integrated solution enables the scientists to immediately execute the processes and easily customize both processes and data model to continuously changing experimental setups. The data modeling is provided by the Dynamic Web Application framework and the process modeling functionalities by the Java Application Building Center, both following the paradigm of eXtreme Model-Driven Design for model-driven software development.

AB - We apply an IDE for user-level process design and composition to a real-life case study: A complex workflow from an ongoing global cancer-related cachexia research project. Originally buried in a manually operated spreadsheet, the process is now fully automated and integrated into the project database, ensuring the immediate availability, consistency and reproducibility of the outcomes. Our integrated solution enables the scientists to immediately execute the processes and easily customize both processes and data model to continuously changing experimental setups. The data modeling is provided by the Dynamic Web Application framework and the process modeling functionalities by the Java Application Building Center, both following the paradigm of eXtreme Model-Driven Design for model-driven software development.

KW - Domainspecific modeling

KW - Model-driven software development

KW - Process modeling

KW - Scientific workflows

KW - Workflow design

UR - https://www.scopus.com/pages/publications/85059087280

U2 - 10.1145/3193992.3194002

DO - 10.1145/3193992.3194002

M3 - Conference contribution

AN - SCOPUS:85059087280

T3 - Proceedings - 2018 ACM/IEEE Conference on Formal Methods in Software Engineering, FormaliSE 2018

SP - 60

EP - 63

BT - Proceedings - 2018 ACM/IEEE Conference on Formal Methods in Software Engineering, FormaliSE 2018

PB - Institute of Electrical and Electronics Engineers Inc.

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Y2 - 2 June 2018

ER -

Wickert A, Lamprecht AL, Margaria T. Domain-specific Design of Patient Classification in Cancer-Related Cachexia Research. In Proceedings - 2018 ACM/IEEE Conference on Formal Methods in Software Engineering, FormaliSE 2018. Institute of Electrical and Electronics Engineers Inc. 2018. p. 60-63. (Proceedings - 2018 ACM/IEEE Conference on Formal Methods in Software Engineering, FormaliSE 2018). doi: 10.1145/3193992.3194002

Domain-specific Design of Patient Classification in Cancer-Related Cachexia Research

Abstract

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UN SDGs

Keywords

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