TY - JOUR
T1 - Increased frequency of the uncommon tumor necrosis factor-857T allele in british and dutch patients with sarcoidosis
AU - Grutters, Jan C.
AU - Sato, Hiroe
AU - Pantelidis, Panagiotis
AU - Lagan, Anna L.
AU - McGrath, Deirdre S.
AU - Lammers, Jan Willem J.
AU - Van Den Bosch, Jules M.M.
AU - Wells, Athol U.
AU - Du Bois, Roland M.
AU - Welsh, Kenneth I.
PY - 2002/4/15
Y1 - 2002/4/15
N2 - Interindividual variation in the expression of tumor necrosis factor (TNF)-α suggests the existence of functionally distinct TNF alleles, which might play a role in sarcoidosis. We investigated five potentially functional biallelic TNF promoter polymorphisms at nucleotide positions -1,031(T/C), -863(C/A), -857(C/T), -307(G/A), and -237(G/A) in two clinically well-defined groups of white patients (British [UK] and Dutch [NL]) with sarcoidosis, each with their own control subjects. Polymorphisms were determined using SSP-PCR. A total of 772 individuals were studied (96 UK patients, 354 UK control subjects, 100 NL patients, 222 NL controls). A significant increase in the rarer TNF -857T allele was found in both sarcoidosis populations. In total 25.5% of the sarcoid patients carried the TNF -857T allele versus 14.1% of the control subjects (p = 0.003, pc = 0.02). In the sarcoidosis group the allele frequency of this polymorphism was 13.5% versus 7.3% in the control subjects (p = 0.0003, pc = 0.002). Subgroup analysis showed a significant increase in the rarer TNF -307A (TNF-2) allele in patients with Löfgren's syndrome (p = 0.006, pc = 0.03). Our finding does not necessarily imply that the two polymorphisms relate to different functions; it may be that one or both are in linkage disequilibrium with the causal site. This requires further studies of functionality and linkage disequilibrium.
AB - Interindividual variation in the expression of tumor necrosis factor (TNF)-α suggests the existence of functionally distinct TNF alleles, which might play a role in sarcoidosis. We investigated five potentially functional biallelic TNF promoter polymorphisms at nucleotide positions -1,031(T/C), -863(C/A), -857(C/T), -307(G/A), and -237(G/A) in two clinically well-defined groups of white patients (British [UK] and Dutch [NL]) with sarcoidosis, each with their own control subjects. Polymorphisms were determined using SSP-PCR. A total of 772 individuals were studied (96 UK patients, 354 UK control subjects, 100 NL patients, 222 NL controls). A significant increase in the rarer TNF -857T allele was found in both sarcoidosis populations. In total 25.5% of the sarcoid patients carried the TNF -857T allele versus 14.1% of the control subjects (p = 0.003, pc = 0.02). In the sarcoidosis group the allele frequency of this polymorphism was 13.5% versus 7.3% in the control subjects (p = 0.0003, pc = 0.002). Subgroup analysis showed a significant increase in the rarer TNF -307A (TNF-2) allele in patients with Löfgren's syndrome (p = 0.006, pc = 0.03). Our finding does not necessarily imply that the two polymorphisms relate to different functions; it may be that one or both are in linkage disequilibrium with the causal site. This requires further studies of functionality and linkage disequilibrium.
KW - Cytokine
KW - Polymorphism (genetics)
KW - Sarcoidosis
KW - Tumour necrosis factor-α
UR - http://www.scopus.com/inward/record.url?scp=0037090431&partnerID=8YFLogxK
U2 - 10.1164/ajrccm.165.8.200110-0320
DO - 10.1164/ajrccm.165.8.200110-0320
M3 - Article
C2 - 11956055
AN - SCOPUS:0037090431
SN - 1073-449X
VL - 165
SP - 1119
EP - 1124
JO - American Journal of Respiratory and Critical Care Medicine
JF - American Journal of Respiratory and Critical Care Medicine
IS - 8
ER -