MADE4: An R package for multivariate analysis of gene expression data

Aedín C. Culhane; Jean Thioulouse; Guy Perrière; Desmond G. Higgins

doi:10.1093/bioinformatics/bti394

MADE4: An R package for multivariate analysis of gene expression data

Aedín C. Culhane, Jean Thioulouse, Guy Perrière, Desmond G. Higgins

Research output: Contribution to journal › Article › peer-review

Abstract

Summary: MADE4, microarray ade4, is a software package that facilitates multivariate analysis of microarray gene-expression data. MADE4 accepts a wide variety of gene-expression data formats. MADE4 takes advantage of the extensive multivariate statistical and graphical functions in the R package ade4, extending these for application to microarray data. In addition, MADE4 provides new graphical and visualization tools that aid in interpretation of multivariate analysis of microarray data.

Original language	English
Pages (from-to)	2789-2790
Number of pages	2
Journal	Bioinformatics
Volume	21
Issue number	11
DOIs	https://doi.org/10.1093/bioinformatics/bti394
Publication status	Published - 1 Jun 2005
Externally published	Yes

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title = "MADE4: An R package for multivariate analysis of gene expression data",

abstract = "Summary: MADE4, microarray ade4, is a software package that facilitates multivariate analysis of microarray gene-expression data. MADE4 accepts a wide variety of gene-expression data formats. MADE4 takes advantage of the extensive multivariate statistical and graphical functions in the R package ade4, extending these for application to microarray data. In addition, MADE4 provides new graphical and visualization tools that aid in interpretation of multivariate analysis of microarray data.",

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AU - Thioulouse, Jean

AU - Perrière, Guy

AU - Higgins, Desmond G.

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N2 - Summary: MADE4, microarray ade4, is a software package that facilitates multivariate analysis of microarray gene-expression data. MADE4 accepts a wide variety of gene-expression data formats. MADE4 takes advantage of the extensive multivariate statistical and graphical functions in the R package ade4, extending these for application to microarray data. In addition, MADE4 provides new graphical and visualization tools that aid in interpretation of multivariate analysis of microarray data.

AB - Summary: MADE4, microarray ade4, is a software package that facilitates multivariate analysis of microarray gene-expression data. MADE4 accepts a wide variety of gene-expression data formats. MADE4 takes advantage of the extensive multivariate statistical and graphical functions in the R package ade4, extending these for application to microarray data. In addition, MADE4 provides new graphical and visualization tools that aid in interpretation of multivariate analysis of microarray data.

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MADE4: An R package for multivariate analysis of gene expression data

Abstract

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